软件包：canu（2.0+dfsg-2 以及其他的）

[ 源代码： canu  ]

single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

其他与 canu 有关的软件包

• dep: gnuplot

  Command-line driven interactive plotting program.
  同时作为一个虚包由这些包填实： gnuplot-nox, gnuplot-qt, gnuplot-x11

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libfilesys-df-perl

  Module to obtain filesystem disk space information

• dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386, mipsel]

  GCC 支持库

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, mipsel]

• dep: libgomp1 (>= 6)

  GCC OpenMP（GOMP）支持库

• dep: libstdc++6 (>= 11)

  GNU 标准 C++ 库，第3版

• dep: mhap

  locality-sensitive hashing to detect long-read overlaps

• dep: perl

  拉里 沃尔的实用报表提取语言(Perl)

• sug: nanopolish

  consensus caller for nanopore sequencing data

• sug: pbgenomicconsensus

  软件包暂时不可用

下载 canu

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	2.0+dfsg-2+b1	1,182.4 kB	8,799.0 kB	[文件列表]
arm64	2.0+dfsg-2+b1	1,077.8 kB	9,886.0 kB	[文件列表]
armel	2.0+dfsg-2+b1	1,027.4 kB	9,663.0 kB	[文件列表]
armhf	2.0+dfsg-2+b1	1,041.9 kB	7,955.0 kB	[文件列表]
i386	2.0+dfsg-2+b1	1,317.8 kB	10,030.0 kB	[文件列表]
mips64el	2.0+dfsg-2+b1	1,297.2 kB	12,589.0 kB	[文件列表]
mipsel	2.0+dfsg-2+b1	1,351.8 kB	12,568.0 kB	[文件列表]
ppc64el	2.0+dfsg-2+b1	1,204.7 kB	12,855.0 kB	[文件列表]
s390x	2.0+dfsg-2+b1	1,073.5 kB	8,954.0 kB	[文件列表]