Paket: r-bioc-multtest (2.60.0-1 och andra)

[ Källkod: r-bioc-multtest  ]

Bioconductor resampling-based multiple hypothesis testing

Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments.

Andra paket besläktade med r-bioc-multtest

• dep: libc6 (>= 2.27) [riscv64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.29) [ej alpha, ia64, riscv64, sh4]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.29) [alpha]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-api-bioc-3.18 [hppa, ia64, m68k, sh4, x32]

  Paketet inte tillgängligt

• dep: r-api-bioc-3.19 [ej hppa, ia64, m68k, sh4, x32]

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-bioc-biobase [hppa, ia64, m68k, sh4, x32]

  base functions for Bioconductor

  dep: r-bioc-biobase (>= 2.64.0) [ej hppa, ia64, m68k, sh4, x32]

• dep: r-bioc-biocgenerics [hppa, ia64, m68k, sh4, x32]

  generic functions for Bioconductor

  dep: r-bioc-biocgenerics (>= 0.50.0) [ej hppa, ia64, m68k, sh4, x32]

• dep: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• dep: r-cran-survival

  GNU R package for survival analysis

• sug: r-cran-snow

  GNU R package for 'simple network of workstations'

Hämta r-bioc-multtest

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	2.60.0-1	823,6 kbyte	1.074,0 kbyte	[filförteckning]
amd64	2.60.0-1	823,7 kbyte	1.062,0 kbyte	[filförteckning]
arm64	2.60.0-1	822,2 kbyte	1.074,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	2.58.0-1	818,6 kbyte	1.063,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	2.58.0-1	824,4 kbyte	1.102,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	2.58.0-1	813,5 kbyte	1.046,0 kbyte	[filförteckning]
mips64el	2.60.0-1	822,1 kbyte	1.078,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	2.60.0-1	828,4 kbyte	1.139,0 kbyte	[filförteckning]
ppc64el	2.60.0-1	828,0 kbyte	1.074,0 kbyte	[filförteckning]
riscv64	2.60.0-1	823,4 kbyte	1.050,0 kbyte	[filförteckning]
s390x	2.60.0-1	827,1 kbyte	1.070,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	2.58.0-1	818,1 kbyte	1.070,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	2.60.0-1	819,7 kbyte	2.036,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	2.58.0-1	817,3 kbyte	1.049,0 kbyte	[filförteckning]