Paket: r-bioc-multtest (2.46.0-1)

[ Källkod: r-bioc-multtest  ]

Bioconductor resampling-based multiple hypothesis testing

Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments.

Andra paket besläktade med r-bioc-multtest

• dep: libc6 (>= 2.29)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-api-bioc-3.12

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-base-core (>= 4.0.3-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• dep: r-cran-survival

  GNU R package for survival analysis

• sug: r-cran-snow

  GNU R package for 'simple network of workstations'

Hämta r-bioc-multtest

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	822,7 kbyte	1.065,0 kbyte	[filförteckning]
arm64	820,9 kbyte	1.062,0 kbyte	[filförteckning]
armel	821,6 kbyte	1.061,0 kbyte	[filförteckning]
armhf	819,1 kbyte	1.049,0 kbyte	[filförteckning]
i386	823,7 kbyte	1.068,0 kbyte	[filförteckning]
mips64el	821,3 kbyte	1.066,0 kbyte	[filförteckning]
mipsel	820,7 kbyte	1.064,0 kbyte	[filförteckning]
ppc64el	826,6 kbyte	1.082,0 kbyte	[filförteckning]
s390x	821,9 kbyte	1.069,0 kbyte	[filförteckning]