Pakket: r-bioc-multtest (2.62.0-2 en anderen)

[ Bron: r-bioc-multtest  ]

Bioconductor resampling-based multiple hypothesis testing

Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments.

Andere aan r-bioc-multtest gerelateerde pakketten

• dep: libc6 (>= 2.27) [riscv64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.29) [niet alpha, ia64, riscv64, sh4]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.29) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: r-api-4.0

  virtueel pakket geboden door r-base-core

• dep: r-api-bioc-3.18 [hppa, ia64, m68k, sh4, x32]

  Pakket niet beschikbaar

• dep: r-api-bioc-3.20 [niet hppa, ia64, m68k, sh4, x32]

  virtueel pakket geboden door r-bioc-biocgenerics

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• dep: r-cran-survival

  GNU R package for survival analysis

• sug: r-cran-snow

  GNU R package for 'simple network of workstations'

r-bioc-multtest downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	2.62.0-2	823,3 kB	1.074,0 kB	[overzicht]
amd64	2.62.0-2	823,3 kB	1.062,0 kB	[overzicht]
arm64	2.62.0-2	821,7 kB	1.074,0 kB	[overzicht]
hppa (unofficial port)	2.58.0-1	818,6 kB	1.063,0 kB	[overzicht]
ia64 (unofficial port)	2.58.0-1	824,4 kB	1.102,0 kB	[overzicht]
m68k (unofficial port)	2.58.0-1	813,5 kB	1.046,0 kB	[overzicht]
mips64el	2.62.0-2	821,8 kB	1.078,0 kB	[overzicht]
ppc64 (unofficial port)	2.62.0-2	828,0 kB	1.139,0 kB	[overzicht]
ppc64el	2.62.0-2	827,5 kB	1.074,0 kB	[overzicht]
riscv64	2.62.0-2	822,9 kB	1.050,0 kB	[overzicht]
s390x	2.62.0-2	826,6 kB	1.070,0 kB	[overzicht]
sh4 (unofficial port)	2.58.0-1	818,1 kB	1.070,0 kB	[overzicht]
sparc64 (unofficial port)	2.62.0-2	819,7 kB	2.036,0 kB	[overzicht]
x32 (unofficial port)	2.58.0-1	817,3 kB	1.049,0 kB	[overzicht]