Package: r-bioc-multtest (2.60.0-1 and others)

[ Source: r-bioc-multtest  ]

Bioconductor resampling-based multiple hypothesis testing

Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments.

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Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.60.0-1	823.6 kB	1,074.0 kB	[list of files]
amd64	2.60.0-1	823.7 kB	1,062.0 kB	[list of files]
arm64	2.60.0-1	822.2 kB	1,074.0 kB	[list of files]
hppa (unofficial port)	2.58.0-1	818.6 kB	1,063.0 kB	[list of files]
ia64 (unofficial port)	2.58.0-1	824.4 kB	1,102.0 kB	[list of files]
m68k (unofficial port)	2.58.0-1	813.5 kB	1,046.0 kB	[list of files]
mips64el	2.60.0-1	822.1 kB	1,078.0 kB	[list of files]
ppc64 (unofficial port)	2.60.0-1	828.4 kB	1,139.0 kB	[list of files]
ppc64el	2.60.0-1	828.0 kB	1,074.0 kB	[list of files]
riscv64	2.60.0-1	823.4 kB	1,050.0 kB	[list of files]
s390x	2.60.0-1	827.1 kB	1,070.0 kB	[list of files]
sh4 (unofficial port)	2.58.0-1	818.1 kB	1,070.0 kB	[list of files]
sparc64 (unofficial port)	2.60.0-1	819.7 kB	2,036.0 kB	[list of files]
x32 (unofficial port)	2.58.0-1	817.3 kB	1,049.0 kB	[list of files]