Pakket: porechop (0.2.4+dfsg-6 en anderen)

[ Bron: porechop  ]

adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

Andere aan porechop gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.4) [alpha]

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, hppa, ia64, m68k]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3~)

porechop downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.2.4+dfsg-6	54,6 kB	290,0 kB	[overzicht]
amd64	0.2.4+dfsg-6	55,9 kB	238,0 kB	[overzicht]
arm64	0.2.4+dfsg-6+b1	53,2 kB	227,0 kB	[overzicht]
armel	0.2.4+dfsg-6	51,0 kB	221,0 kB	[overzicht]
armhf	0.2.4+dfsg-6	51,2 kB	205,0 kB	[overzicht]
hppa (unofficial port)	0.2.4+dfsg-6	55,4 kB	230,0 kB	[overzicht]
i386	0.2.4+dfsg-6	56,9 kB	237,0 kB	[overzicht]
ia64 (unofficial port)	0.2.4+dfsg-5	61,8 kB	290,0 kB	[overzicht]
m68k (unofficial port)	0.2.4+dfsg-6	53,0 kB	225,0 kB	[overzicht]
mips64el	0.2.4+dfsg-6	52,9 kB	231,0 kB	[overzicht]
ppc64 (unofficial port)	0.2.4+dfsg-6	57,8 kB	291,0 kB	[overzicht]
ppc64el	0.2.4+dfsg-6	58,2 kB	290,0 kB	[overzicht]
riscv64	0.2.4+dfsg-6	55,6 kB	218,0 kB	[overzicht]
s390x	0.2.4+dfsg-6	57,7 kB	242,0 kB	[overzicht]
sh4 (unofficial port)	0.2.4+dfsg-6	58,6 kB	225,0 kB	[overzicht]
sparc64 (unofficial port)	0.2.4+dfsg-6	51,3 kB	1.188,0 kB	[overzicht]
x32 (unofficial port)	0.2.4+dfsg-6	55,4 kB	233,0 kB	[overzicht]