Package: porechop (0.2.4+dfsg-6 and others)

[ Source: porechop  ]

adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

Other Packages Related to porechop

• dep: libc6 (>= 2.14) [amd64]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.4) [alpha]

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k]

  GCC támogató programkönyvtár

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC támogató programkönyvtár

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC támogató programkönyvtár

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

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• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3~)

Download porechop

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.2.4+dfsg-6	54.6 kB	290.0 kB	[list of files]
amd64	0.2.4+dfsg-6	55.9 kB	238.0 kB	[list of files]
arm64	0.2.4+dfsg-6+b1	53.2 kB	227.0 kB	[list of files]
armel	0.2.4+dfsg-6	51.0 kB	221.0 kB	[list of files]
armhf	0.2.4+dfsg-6	51.2 kB	205.0 kB	[list of files]
hppa (unofficial port)	0.2.4+dfsg-6	55.4 kB	230.0 kB	[list of files]
i386	0.2.4+dfsg-6	56.9 kB	237.0 kB	[list of files]
ia64 (unofficial port)	0.2.4+dfsg-5	61.8 kB	290.0 kB	[list of files]
m68k (unofficial port)	0.2.4+dfsg-6	53.0 kB	225.0 kB	[list of files]
mips64el	0.2.4+dfsg-6	52.9 kB	231.0 kB	[list of files]
ppc64 (unofficial port)	0.2.4+dfsg-6	57.8 kB	291.0 kB	[list of files]
ppc64el	0.2.4+dfsg-6	58.2 kB	290.0 kB	[list of files]
riscv64	0.2.4+dfsg-6	55.6 kB	218.0 kB	[list of files]
s390x	0.2.4+dfsg-6	57.7 kB	242.0 kB	[list of files]
sh4 (unofficial port)	0.2.4+dfsg-6	58.6 kB	225.0 kB	[list of files]
sparc64 (unofficial port)	0.2.4+dfsg-6	51.3 kB	1,188.0 kB	[list of files]
x32 (unofficial port)	0.2.4+dfsg-6	55.4 kB	233.0 kB	[list of files]