Pakket: libssw0 (1.1-15 en anderen)

[ Bron: libssw  ]

fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Tags: Role: Shared Library

Andere aan libssw0 gerelateerde pakketten

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.4) [alpha]

• dep: libgcc-s1 (>= 3.3.1) [niet armel, armhf, ia64, m68k]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: zlib1g

  compressiebibliotheek - programma's

libssw0 downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.1-15	24,1 kB	84,0 kB	[overzicht]
amd64	1.1-15+b1	21,2 kB	64,0 kB	[overzicht]
arm64	1.1-15+b1	19,5 kB	84,0 kB	[overzicht]
armel	1.1-15+b1	20,8 kB	60,0 kB	[overzicht]
armhf	1.1-15+b1	21,1 kB	52,0 kB	[overzicht]
i386	1.1-15+b1	26,1 kB	84,0 kB	[overzicht]
ia64 (unofficial port)	1.1-14	28,7 kB	89,0 kB	[overzicht]
m68k (unofficial port)	1.1-15+b1	22,9 kB	68,0 kB	[overzicht]
mips64el	1.1-15+b1	25,2 kB	86,0 kB	[overzicht]
ppc64 (unofficial port)	1.1-15+b1	25,2 kB	84,0 kB	[overzicht]
ppc64el	1.1-15+b1	22,2 kB	84,0 kB	[overzicht]
riscv64	1.1-15+b1	25,3 kB	60,0 kB	[overzicht]
s390x	1.1-15+b1	25,5 kB	68,0 kB	[overzicht]
sh4 (unofficial port)	1.1-15	27,0 kB	83,0 kB	[overzicht]
sparc64 (unofficial port)	1.1-15+b1	23,8 kB	1.046,0 kB	[overzicht]
x32 (unofficial port)	1.1-15+b1	21,2 kB	60,0 kB	[overzicht]