Pakket: garli-mpi (2.1-9 en anderen)

[ Bron: garli  ]

phylogenetic analysis of molecular sequence data using maximum-likelihood (MPI)

GARLI, Genetic Algorithm for Rapid Likelihood Inference is a program for inferring phylogenetic trees. Using an approach similar to a classical genetic algorithm, it rapidly searches the space of evolutionary trees and model parameters to find the solution maximizing the likelihood score. It implements nucleotide, amino acid and codon-based models of sequence evolution, and runs on all platforms. The latest version adds support for partitioned models and morphology-like datatypes.

This version of Garli is using MPI.

Andere aan garli-mpi gerelateerde pakketten

• dep: libc6 (>= 2.38) [niet arm64, ia64, loong64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.40) [arm64, loong64, sh4]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf, hppa, ia64, m68k, riscv64, sh4, sparc64]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libmpich12 [armel, armhf, hppa, i386, m68k, sh4]

  Shared libraries for MPICH

  dep: libmpich12 (>= 4.2.0) [x32]

• dep: libncl2 (>= 2.1.18) [amd64]

  NEXUS Class Library

  dep: libncl2 (>= 2.1.21+git20210811.b1213a7) [niet amd64]

• dep: libopenmpi3t64 (>= 4.1.6) [ia64]

  high performance message passing library -- shared library

• dep: libopenmpi40 (>= 5.0.6) [niet armel, armhf, hppa, i386, ia64, m68k, sh4, x32]

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: mpi-default-bin [niet ia64]

  Standard MPI runtime programs (metapackage)

• dep: openmpi-bin [ia64]

  high performance message passing library -- binaries

garli-mpi downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	2.1-9	622,2 kB	1.656,0 kB	[overzicht]
arm64	2.1-9	560,1 kB	1.428,0 kB	[overzicht]
armel	2.1-9	537,3 kB	1.427,0 kB	[overzicht]
armhf	2.1-9	505,2 kB	979,0 kB	[overzicht]
hppa (unofficial port)	2.1-9	595,3 kB	1.508,0 kB	[overzicht]
i386	2.1-9	556,0 kB	1.571,0 kB	[overzicht]
ia64 (unofficial port)	2.1-7+b1	937,5 kB	3.298,0 kB	[overzicht]
loong64 (unofficial port)	2.1-9	633,1 kB	1.620,0 kB	[overzicht]
m68k (unofficial port)	2.1-9	501,8 kB	1.531,0 kB	[overzicht]
mips64el	2.1-9	609,3 kB	1.838,0 kB	[overzicht]
ppc64 (unofficial port)	2.1-9	639,1 kB	1.812,0 kB	[overzicht]
ppc64el	2.1-9	687,3 kB	1.748,0 kB	[overzicht]
riscv64	2.1-9	657,0 kB	1.272,0 kB	[overzicht]
s390x	2.1-9	509,1 kB	1.572,0 kB	[overzicht]
sh4 (unofficial port)	2.1-9	677,7 kB	1.364,0 kB	[overzicht]
sparc64 (unofficial port)	2.1-9	528,8 kB	2.075,0 kB	[overzicht]
x32 (unofficial port)	2.1-9	622,9 kB	1.615,0 kB	[overzicht]