Package: porechop (0.2.4+dfsg-6 and others)

[ Source: porechop  ]

adapter trimmer for Oxford Nanopore reads

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.

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  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.38) [loong64]

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Download porechop

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.2.4+dfsg-6	54.6 kB	290.0 kB	[list of files]
amd64	0.2.4+dfsg-6	55.9 kB	238.0 kB	[list of files]
arm64	0.2.4+dfsg-6+b2	53.3 kB	227.0 kB	[list of files]
armel	0.2.4+dfsg-6	51.0 kB	221.0 kB	[list of files]
armhf	0.2.4+dfsg-6	51.2 kB	205.0 kB	[list of files]
hppa (unofficial port)	0.2.4+dfsg-6	55.4 kB	230.0 kB	[list of files]
i386	0.2.4+dfsg-6	56.9 kB	237.0 kB	[list of files]
ia64 (unofficial port)	0.2.4+dfsg-5	61.8 kB	290.0 kB	[list of files]
loong64 (unofficial port)	0.2.4+dfsg-6	52.9 kB	226.0 kB	[list of files]
m68k (unofficial port)	0.2.4+dfsg-6	53.0 kB	225.0 kB	[list of files]
mips64el	0.2.4+dfsg-6	52.9 kB	231.0 kB	[list of files]
ppc64 (unofficial port)	0.2.4+dfsg-6	57.8 kB	291.0 kB	[list of files]
ppc64el	0.2.4+dfsg-6	58.2 kB	290.0 kB	[list of files]
riscv64	0.2.4+dfsg-6	55.6 kB	218.0 kB	[list of files]
s390x	0.2.4+dfsg-6	57.7 kB	242.0 kB	[list of files]
sh4 (unofficial port)	0.2.4+dfsg-6	58.6 kB	225.0 kB	[list of files]
sparc64 (unofficial port)	0.2.4+dfsg-6	51.3 kB	1,188.0 kB	[list of files]
x32 (unofficial port)	0.2.4+dfsg-6	55.4 kB	233.0 kB	[list of files]