[ Source: porechop ]
Package: porechop (0.2.4+dfsg-8)
Links for porechop
Debian Resources:
Download Source Package porechop:
Maintainers:
External Resources:
- Homepage [rrwick.github.io]
Similar packages:
Experimental package
Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.
adapter trimmer for Oxford Nanopore reads
Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity. Porechop also supports demultiplexing of Nanopore reads that were barcoded with the Native Barcoding Kit, PCR Barcoding Kit or Rapid Barcoding Kit.
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Download porechop
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 56.4 kB | 237.0 kB | [list of files] |
| arm64 | 53.2 kB | 225.0 kB | [list of files] |
| armel | 51.1 kB | 217.0 kB | [list of files] |
| armhf | 51.3 kB | 205.0 kB | [list of files] |
| hppa (unofficial port) | 55.6 kB | 226.0 kB | [list of files] |
| i386 | 57.4 kB | 237.0 kB | [list of files] |
| m68k (unofficial port) | 53.1 kB | 225.0 kB | [list of files] |
| mips64el | 53.9 kB | 292.0 kB | [list of files] |
| ppc64 (unofficial port) | 57.6 kB | 290.0 kB | [list of files] |
| ppc64el | 57.8 kB | 289.0 kB | [list of files] |
| riscv64 | 55.8 kB | 213.0 kB | [list of files] |
| s390x | 56.9 kB | 237.0 kB | [list of files] |
| sh4 (unofficial port) | 59.0 kB | 225.0 kB | [list of files] |
| sparc64 (unofficial port) | 51.3 kB | 1,187.0 kB | [list of files] |
| x32 (unofficial port) | 56.3 kB | 233.0 kB | [list of files] |