套件：biobambam2（2.0.185+ds-2）

[ 原始碼： biobambam2  ]

tools for early stage alignment file processing

This package contains some tools for processing BAM files, including

  bamsormadup:  parallel sorting and duplicate marking
  bamcollate2:  reads BAM and writes BAM reordered such that alignment
                or collated by query name
  bammarkduplicates: reads BAM and writes BAM with duplicate alignments
                marked using the BAM flags field
  bammaskflags: reads BAM and writes BAM while masking (removing) bits
                from the flags column
  bamrecompress: reads BAM and writes BAM with a defined compression
                 setting. This tool is capable of multi-threading.
  bamsort:       reads BAM and writes BAM resorted by coordinates or
                 query name
  bamtofastq:    reads BAM and writes FastQ; output can be collated
                 or uncollated by query name

其他與 biobambam2 有關的套件

• dep: libc6 (>= 2.34) [除 alpha, ia64]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [ppc64el]

  GCC 支援函式庫

  dep: libgcc-s1 (>= 3.4) [除 ia64, ppc64el]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libmaus2-2 (>= 2.0.813+ds)

  collection of data structures and algorithms for biobambam

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: zlib1g (>= 1:1.1.4)

  壓縮函式庫 - 跑程式時用(runtime)

下載 biobambam2

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
alpha （非官方移植版）	9，150。3 kB	73，920。0 kB	[檔案列表]
amd64	9，203。8 kB	64，327。0 kB	[檔案列表]
ia64 （非官方移植版）	10，230。3 kB	117，346。0 kB	[檔案列表]
mips64el	7，602。0 kB	75，740。0 kB	[檔案列表]
ppc64el	8，944。3 kB	76，579。0 kB	[檔案列表]
riscv64	8，815。6 kB	51，675。0 kB	[檔案列表]
x32 （非官方移植版）	9，225。9 kB	60，999。0 kB	[檔案列表]