软件包：biobambam2（2.0.185+ds-2）

[ 源代码： biobambam2  ]

tools for early stage alignment file processing

This package contains some tools for processing BAM files, including

  bamsormadup:  parallel sorting and duplicate marking
  bamcollate2:  reads BAM and writes BAM reordered such that alignment
                or collated by query name
  bammarkduplicates: reads BAM and writes BAM with duplicate alignments
                marked using the BAM flags field
  bammaskflags: reads BAM and writes BAM while masking (removing) bits
                from the flags column
  bamrecompress: reads BAM and writes BAM with a defined compression
                 setting. This tool is capable of multi-threading.
  bamsort:       reads BAM and writes BAM resorted by coordinates or
                 query name
  bamtofastq:    reads BAM and writes FastQ; output can be collated
                 or uncollated by query name

其他与 biobambam2 有关的软件包

• dep: libc6 (>= 2.34) [除 alpha, ia64]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [ppc64el]

  GCC 支持库

  dep: libgcc-s1 (>= 3.4) [除 i386, ia64, ppc64el]

  dep: libgcc-s1 (>= 4.2) [ia64]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libgomp1 (>= 6)

  GCC OpenMP（GOMP）支持库

• dep: libmaus2-2 (>= 2.0.813+ds)

  collection of data structures and algorithms for biobambam

• dep: libstdc++6 (>= 13.1)

  GNU 标准 C++ 库，第3版

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: zlib1g (>= 1:1.1.4)

  压缩库 - 运行时

下载 biobambam2

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
alpha （非官方移植版）	9,150.3 kB	73,920.0 kB	[文件列表]
amd64	9,203.8 kB	64,327.0 kB	[文件列表]
i386	9,933.6 kB	71,707.0 kB	[文件列表]
ia64 （非官方移植版）	10,230.3 kB	117,346.0 kB	[文件列表]
mips64el	7,602.0 kB	75,740.0 kB	[文件列表]
ppc64el	8,944.3 kB	76,579.0 kB	[文件列表]
riscv64	8,815.6 kB	51,675.0 kB	[文件列表]
x32 （非官方移植版）	9,225.9 kB	60,999.0 kB	[文件列表]