软件包：examl（3.0.22-6 以及其他的）

[ 源代码： examl  ]

Exascale Maximum Likelihood (ExaML) code for phylogenetic inference

Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees.

ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data.

ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency.

It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.

其他与 examl 有关的软件包

• dep: libc6 (>= 2.38)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libmpich12 [armel, armhf, i386]

  Shared libraries for MPICH

• dep: libopenmpi40 (>= 5.0.6) [除 armel, armhf, i386]

  high performance message passing library -- shared library

• dep: mpi-default-bin

  Standard MPI runtime programs (metapackage)

下载 examl

下载可用于所有硬件架构的

硬件架构	版本	软件包大小	安装后大小	文件
amd64	3.0.22-6+b2	937.8 kB	6,019.0 kB	[文件列表]
arm64	3.0.22-6+b2	778.7 kB	1,665.0 kB	[文件列表]
armel	3.0.22-6+b1	797.3 kB	2,046.0 kB	[文件列表]
armhf	3.0.22-6+b1	786.3 kB	1,598.0 kB	[文件列表]
i386	3.0.22-6+b1	1,078.9 kB	7,013.0 kB	[文件列表]
mips64el	3.0.22-6+b2	818.6 kB	1,813.0 kB	[文件列表]
ppc64el	3.0.22-6+b2	837.7 kB	1,793.0 kB	[文件列表]
riscv64	3.0.22-6+b2	835.6 kB	1,577.0 kB	[文件列表]
s390x	3.0.22-6+b2	826.1 kB	2,061.0 kB	[文件列表]