软件包：examl（3.0.22-3 以及其他的）
Exascale Maximum Likelihood (ExaML) code for phylogenetic inference
Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees.
ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data.
ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency.
It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.
其他与 examl 有关的软件包
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- dep: libc6 (>= 2.34)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libopenmpi3 (>= 4.1.4)
- high performance message passing library -- shared library
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- dep: openmpi-bin
- high performance message passing library -- binaries
下载 examl
| 硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
|---|---|---|---|---|
| amd64 | 3.0.22-3+b2 | 928.7 kB | 5,930.0 kB | [文件列表] |
| arm64 | 3.0.22-3+b2 | 780.3 kB | 1,664.0 kB | [文件列表] |
| armel | 3.0.22-3+b2 | 798.2 kB | 1,881.0 kB | [文件列表] |
| armhf | 3.0.22-3+b2 | 785.7 kB | 1,513.0 kB | [文件列表] |
| i386 | 3.0.22-3+b2 | 1,087.1 kB | 7,008.0 kB | [文件列表] |
| mips64el | 3.0.22-3+b2 | 815.5 kB | 1,812.0 kB | [文件列表] |
| mipsel | 3.0.22-3+b2 | 828.1 kB | 1,934.0 kB | [文件列表] |
| ppc64el | 3.0.22-3+b2 | 845.8 kB | 1,920.0 kB | [文件列表] |
| s390x | 3.0.22-3+b2 | 816.6 kB | 1,996.0 kB | [文件列表] |