套件：examl（3.0.22-6 以及其他的）

[ 原始碼： examl  ]

Exascale Maximum Likelihood (ExaML) code for phylogenetic inference

Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees.

ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data.

ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency.

It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.

其他與 examl 有關的套件

• dep: libc6 (>= 2.38)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libmpich12 [armel, armhf, i386]

  Shared libraries for MPICH

• dep: libopenmpi40 (>= 5.0.7) [除 armel, armhf, i386]

  high performance message passing library -- shared library

• dep: mpi-default-bin

  Standard MPI runtime programs (metapackage)

下載 examl

下載可用於所有硬體架構的

硬體架構	版本	套件大小	安裝後大小	檔案
amd64	3.0.22-6+b3	959。8 kB	6，371。0 kB	[檔案列表]
arm64	3.0.22-6+b3	778。9 kB	1，665。0 kB	[檔案列表]
armel	3.0.22-6+b2	797。6 kB	2，046。0 kB	[檔案列表]
armhf	3.0.22-6+b2	785。0 kB	1，598。0 kB	[檔案列表]
i386	3.0.22-6+b2	1，094。5 kB	7，369。0 kB	[檔案列表]
mips64el	3.0.22-6+b3	819。7 kB	1，813。0 kB	[檔案列表]
ppc64el	3.0.22-6+b3	836。8 kB	1，793。0 kB	[檔案列表]
riscv64	3.0.22-6+b3	835。0 kB	1，577。0 kB	[檔案列表]
s390x	3.0.22-6+b3	826。1 kB	2，061。0 kB	[檔案列表]