Paket: sumatra (1.0.36+ds-2 ve diğerleri)

sumatra için bağlantılar

Debian Kaynakları:

sumatra Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [metabarcoding.org]

Benzer paketler:

fast and exact comparison and clustering of sequences

With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumatra is a program developed by the LECA. Sumatra aims to compare sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumatra computes the pairwise alignment scores from one dataset or between two datasets, with the possibility to specify a similarity threshold under which pairs of sequences that have a lower similarity are not reported. The output can then go through a classification process with programs such as MCL or MOTHUR.

sumatra ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.16) [x32]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.17) [arm64, ppc64el]

dep: libc6 (>= 2.33) [sh4]

dep: libc6 (>= 2.34) [riscv64]

dep: libc6 (>= 2.7) [alpha, arm64, ia64, ppc64el, riscv64, sh4, x32 değil]
dep: libc6.1 (>= 2.33) [ia64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.7) [alpha]
dep: libsuma1 (>= 1.0.35)

shared library for sumatra and sumaclust
dep: zlib1g (>= 1:1.1.4) [sparc64]

compression library - runtime

sumatra indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	1.0.36+ds-2	78,7 kB	176,0 kB	[dosya listesi]
amd64	1.0.36+ds-2	78,5 kB	136,0 kB	[dosya listesi]
arm64	1.0.36+ds-2	77,8 kB	175,0 kB	[dosya listesi]
armel	1.0.36+ds-2	78,9 kB	175,0 kB	[dosya listesi]
armhf	1.0.36+ds-2	78,0 kB	175,0 kB	[dosya listesi]
hppa (resmi olmayan port)	1.0.36+ds-2	79,7 kB	132,0 kB	[dosya listesi]
i386	1.0.36+ds-2	78,6 kB	135,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	1.0.36+ds-2	81,2 kB	143,0 kB	[dosya listesi]
m68k (resmi olmayan port)	1.0.36+ds-2	77,6 kB	135,0 kB	[dosya listesi]
mips64el	1.0.36+ds-2	78,1 kB	176,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	1.0.36+ds-2	79,1 kB	240,0 kB	[dosya listesi]
ppc64el	1.0.36+ds-2	79,0 kB	176,0 kB	[dosya listesi]
riscv64	1.0.36+ds-2+b1	78,1 kB	129,0 kB	[dosya listesi]
s390x	1.0.36+ds-2	78,1 kB	131,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	1.0.36+ds-2	79,0 kB	175,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	1.0.36+ds-2	77,7 kB	1.136,0 kB	[dosya listesi]
x32 (resmi olmayan port)	1.0.36+ds-2	78,6 kB	135,0 kB	[dosya listesi]