Paket: fastqtl (2.184+v7+dfsg-3)

[ Kaynak: fastqtl  ]

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Etiketler: Alan: Biyoloji, Biyoinformatik, Kullanıcı Arayüzü: interface::commandline, role::program, Amaç: Analiz

fastqtl ile İlgili Diğer Paketler

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  ya da libblas.so.3

  sanal paketi sağlayan libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  Boost.Iostreams Library

• dep: libboost-program-options1.74.0 (>= 1.74.0)

  program options library for C++

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc-s1 (>= 3.0) [armel, armhf değil]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgsl27 (>= 2.7.1)

  GNU Scientific Library (GSL) -- library package

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: r-mathlib

  GNU R standalone mathematics library

• rec: r-cran-argparser

  GNU R command-line argument parser

• rec: r-cran-qvalue

  Paket mevcut değil

• rec: r-cran-tools

  Paket mevcut değil

• sug: fastqtl-doc

  QTL mapper in cis for molecular phenotypes - documentation

fastqtl indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	228,7 kB	772,0 kB	[dosya listesi]
arm64	197,1 kB	724,0 kB	[dosya listesi]
armel	184,0 kB	659,0 kB	[dosya listesi]
armhf	186,6 kB	531,0 kB	[dosya listesi]
i386	228,7 kB	767,0 kB	[dosya listesi]
mips64el	194,8 kB	885,0 kB	[dosya listesi]
mipsel	198,4 kB	879,0 kB	[dosya listesi]
ppc64el	245,2 kB	916,0 kB	[dosya listesi]
s390x	192,3 kB	752,0 kB	[dosya listesi]