Paket: spaln (2.4.1+dfsg-3)
Länkar för spaln
Debianresurser:
Hämta källkodspaketet spaln:
Ansvariga:
Externa resurser:
- Hemsida [www.genome.ist.i.kyoto-u.ac.jp]
Liknande paket:
splicing-aware transcript-alignment to genomic DNA
Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.
spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.
Andra paket besläktade med spaln
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- dep: libc6 (>= 2.29)
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1) [ej armel, armhf]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libstdc++6 (>= 5)
- GNU standardbibliotek v3 för C++
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- dep: spaln-data
- splicing-aware transcript-alignment to genomic DNA (data)
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- dep: zlib1g (>= 1:1.2.0.2)
- Kompressionsbibliotek - körtidspaket
Hämta spaln
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
amd64 | 345,1 kbyte | 855,0 kbyte | [filförteckning] |
arm64 | 311,5 kbyte | 775,0 kbyte | [filförteckning] |
armel | 296,6 kbyte | 781,0 kbyte | [filförteckning] |
armhf | 303,3 kbyte | 589,0 kbyte | [filförteckning] |
i386 | 349,5 kbyte | 881,0 kbyte | [filförteckning] |
mips64el | 330,2 kbyte | 955,0 kbyte | [filförteckning] |
mipsel | 323,5 kbyte | 895,0 kbyte | [filförteckning] |
ppc64el | 360,1 kbyte | 1.120,0 kbyte | [filförteckning] |
s390x | 349,1 kbyte | 1.003,0 kbyte | [filförteckning] |