Paket: ataqv (1.3.0+ds-2)

[ Källkod: ataqv  ]

ATAC-seq QC and visualization

A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.

Märken: Interface Toolkit: Ncurses TUI

Andra paket besläktade med ataqv

• dep: fonts-font-awesome

  iconic font designed for use with Twitter Bootstrap

• dep: libboost-chrono1.74.0 (>= 1.74.0)

  C++ representation of time duration, time point, and clocks

• dep: libboost-filesystem1.74.0 (>= 1.74.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  Boost.Iostreams Library

• dep: libc6 (>= 2.34)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0) [amd64]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [mipsel, ppc64el]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-jquery-datatables

  jQuery plug-in that makes nice tables from different data sources

• dep: libjs-jquery-datatables-extensions

  extensions for the jQuery plug-in for tables from different data sources

• dep: libncurses6 (>= 6)

  shared libraries for terminal handling

• dep: libstdc++6 (>= 11) [ej armel]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 12.2.0-3) [armel]

• dep: node-d3

  Data-Driven Documents to visualize data

• dep: node-normalize.css

  Modern alternative to CSS resets

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: macs

  Model-based Analysis of ChIP-Seq on short reads sequencers

• sug: picard-tools

  Command line tools to manipulate SAM and BAM files

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: wget

  retrieves files from the web

Hämta ataqv

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	3.321,9 kbyte	6.513,0 kbyte	[filförteckning]
arm64	3.266,8 kbyte	6.464,0 kbyte	[filförteckning]
armel	3.239,7 kbyte	6.270,0 kbyte	[filförteckning]
armhf	3.253,4 kbyte	5.886,0 kbyte	[filförteckning]
i386	3.360,7 kbyte	6.658,0 kbyte	[filförteckning]
mips64el	3.263,9 kbyte	6.997,0 kbyte	[filförteckning]
mipsel	3.275,8 kbyte	6.980,0 kbyte	[filförteckning]
ppc64el	3.311,6 kbyte	6.849,0 kbyte	[filförteckning]