Пакет: ataqv (1.3.0+ds-2)

[ Източник: ataqv  ]

ATAC-seq QC and visualization

A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.

Етикети: Interface Toolkit: Ncurses TUI

Други пакети, свързани с ataqv

• dep: fonts-font-awesome

  iconic font designed for use with Twitter Bootstrap

• dep: libboost-chrono1.74.0 (>= 1.74.0)

  C++ representation of time duration, time point, and clocks

• dep: libboost-filesystem1.74.0 (>= 1.74.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  Boost.Iostreams Library

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

• dep: libgcc-s1 (>= 3.0) [amd64]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [mipsel, ppc64el]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-jquery-datatables

  jQuery plug-in that makes nice tables from different data sources

• dep: libjs-jquery-datatables-extensions

  extensions for the jQuery plug-in for tables from different data sources

• dep: libncurses6 (>= 6)

  shared libraries for terminal handling

• dep: libstdc++6 (>= 11) [не armel]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 12.2.0-3) [armel]

• dep: node-d3

  Data-Driven Documents to visualize data

• dep: node-normalize.css

  Modern alternative to CSS resets

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: macs

  Model-based Analysis of ChIP-Seq on short reads sequencers

• sug: picard-tools

  Command line tools to manipulate SAM and BAM files

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: wget

  retrieves files from the web

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Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	3 321,9 кБ	6 513,0 кБ	[списък на файловете]
arm64	3 266,8 кБ	6 464,0 кБ	[списък на файловете]
armel	3 239,7 кБ	6 270,0 кБ	[списък на файловете]
armhf	3 253,4 кБ	5 886,0 кБ	[списък на файловете]
i386	3 360,7 кБ	6 658,0 кБ	[списък на файловете]
mips64el	3 263,9 кБ	6 997,0 кБ	[списък на файловете]
mipsel	3 275,8 кБ	6 980,0 кБ	[списък на файловете]
ppc64el	3 311,6 кБ	6 849,0 кБ	[списък на файловете]