Paket: ataqv (1.3.1+ds-2 och andra)

[ Källkod: ataqv  ]

ATAC-seq QC and visualization

A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.

Märken: Interface Toolkit: Ncurses TUI

Andra paket besläktade med ataqv

• dep: fonts-font-awesome

  iconic font designed for use with Twitter Bootstrap

• dep: libboost-chrono1.74.0 (>= 1.74.0) [hppa]

  C++ representation of time duration, time point, and clocks

• dep: libboost-chrono1.83.0t64 (>= 1.83.0) [ej hppa]

  C++ representation of time duration, time point, and clocks

• dep: libboost-filesystem1.74.0 (>= 1.74.0) [hppa]

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-filesystem1.83.0 (>= 1.83.0) [ej hppa]

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.74.0 (>= 1.74.0) [hppa]

  Boost.Iostreams Library

• dep: libboost-iostreams1.83.0 (>= 1.83.0) [ej hppa]

  Boost.Iostreams Library

• dep: libc6 (>= 2.32) [hppa]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.34) [amd64, armel, m68k, mips64el, ppc64el]

  dep: libc6 (>= 2.37) [loong64, sh4]

  dep: libc6 (>= 2.38) [arm64, armhf, i386, riscv64, x32]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 13.2.0-9) [loong64]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.0) [amd64, x32]

  dep: libgcc-s1 (>= 3.4) [alpha]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64, ppc64el, sh4]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]

  dep: libgcc-s1 (>= 7) [i386]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC stödbibliotek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC stödbibliotek

• dep: libhts3 (>= 1.10) [hppa]

  C library for high-throughput sequencing data formats

• dep: libhts3t64 (>= 1.17) [ej hppa]

  C library for high-throughput sequencing data formats

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-jquery-datatables

  jQuery plug-in that makes nice tables from different data sources

• dep: libjs-jquery-datatables-extensions

  extensions for the jQuery plug-in for tables from different data sources

• dep: libncurses6 (>= 6)

  shared libraries for terminal handling

• dep: libstdc++6 (>= 11) [hppa]

  GNU standardbibliotek v3 för C++

  dep: libstdc++6 (>= 13.1) [ej alpha, arm64, armhf, hppa, i386, riscv64, x32]

  dep: libstdc++6 (>= 14) [arm64, armhf, i386, riscv64, x32]

  dep: libstdc++6 (>= 14-20240127-1) [alpha]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: node-d3

  Data-Driven Documents to visualize data

• dep: node-normalize.css

  Modern alternative to CSS resets

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: macs

  Model-based Analysis of ChIP-Seq on short reads sequencers

• sug: picard-tools

  Command line tools to manipulate SAM and BAM files

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: wget

  retrieves files from the web

Hämta ataqv

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	1.3.1+ds-2+b3	3.279,1 kbyte	6.729,0 kbyte	[filförteckning]
amd64	1.3.1+ds-2+b2	3.320,5 kbyte	6.526,0 kbyte	[filförteckning]
arm64	1.3.1+ds-2+b4	3.258,0 kbyte	6.465,0 kbyte	[filförteckning]
armel	1.3.1+ds-2+b2	3.238,7 kbyte	6.232,0 kbyte	[filförteckning]
armhf	1.3.1+ds-2+b3	3.248,1 kbyte	5.887,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	1.3.0+ds-1	3.327,2 kbyte	6.725,0 kbyte	[filförteckning]
i386	1.3.1+ds-2+b3	3.355,6 kbyte	6.631,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	1.3.1+ds-2+b2	3.358,7 kbyte	8.035,0 kbyte	[filförteckning]
loong64 (inofficiell anpassning)	1.3.1+ds-2+b2	3.260,3 kbyte	6.393,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	1.3.1+ds-2+b3	3.304,0 kbyte	6.487,0 kbyte	[filförteckning]
mips64el	1.3.1+ds-2+b2	3.249,9 kbyte	6.868,0 kbyte	[filförteckning]
ppc64el	1.3.1+ds-2+b2	3.296,8 kbyte	6.723,0 kbyte	[filförteckning]
riscv64	1.3.1+ds-2+b3	3.308,5 kbyte	6.178,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	1.3.1+ds-2+b3	3.377,5 kbyte	6.467,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	1.3.1+ds-2+b3	3.327,9 kbyte	6.416,0 kbyte	[filförteckning]