Pacote: murasaki (1.68.6-13 e outros)

[ Fonte: murasaki  ]

homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

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• dep: murasaki-common

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Download de murasaki

Baixe para todas as arquiteturas disponíveis

Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	1.68.6-13+b3	506.7 kB	3,163.0 kB	[lista de arquivos]
arm64	1.68.6-13+b3	444.2 kB	3,339.0 kB	[lista de arquivos]
armel	1.68.6-13+b3	370.9 kB	2,813.0 kB	[lista de arquivos]
armhf	1.68.6-13+b3	378.1 kB	2,045.0 kB	[lista de arquivos]
i386	1.68.6-13+b3	518.1 kB	3,013.0 kB	[lista de arquivos]
mips64el	1.68.6-13+b3	480.3 kB	4,390.0 kB	[lista de arquivos]
mipsel	1.68.6-13+b3	471.9 kB	3,959.0 kB	[lista de arquivos]
ppc64el	1.68.6-13+b2	503.7 kB	4,171.0 kB	[lista de arquivos]
s390x	1.68.6-13+b2	450.2 kB	3,351.0 kB	[lista de arquivos]