Pakket: freebayes (1.3.7-1 en anderen)

[ Bron: freebayes  ]

Bayesian haplotype-based polymorphism discovery and genotyping

FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.

Andere aan freebayes gerelateerde pakketten

• dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [amd64]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [alpha, sparc64]

  dep: libgcc-s1 (>= 4.2) [ia64, ppc64, ppc64el, sh4]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libseqlib2 (>= 1.2.0) [amd64]

  C++ htslib/bwa-mem/fermi interface for interrogating sequence data

  dep: libseqlib2 (>= 1.2.0+dfsg) [niet amd64]

• dep: libstdc++6 (>= 13.1) [niet alpha]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 13.2.0-2) [alpha]

• dep: libtabixpp0 (>= 1.0.0)

  C++ wrapper to tabix indexer

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: libvcflib1 (>= 1.0.3+dfsg) [ia64, m68k, ppc64, sh4, sparc64]

  C++ library for parsing and manipulating VCF files

• dep: libvcflib2 (>= 1.0.9+dfsg1) [niet ia64, m68k, ppc64, sh4, sparc64]

  C++ library for parsing and manipulating VCF files

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.1.4)

  compressiebibliotheek - programma's

• rec: parallel

  build and execute command lines from standard input in parallel

freebayes downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.3.7-1	1.451,7 kB	4.308,0 kB	[overzicht]
amd64	1.3.7-1	1.452,7 kB	4.024,0 kB	[overzicht]
arm64	1.3.7-1	1.397,0 kB	3.919,0 kB	[overzicht]
ia64 (unofficial port)	1.3.6-2+b1	1.561,5 kB	5.564,0 kB	[overzicht]
m68k (unofficial port)	1.3.6-2+b1	1.396,9 kB	3.912,0 kB	[overzicht]
mips64el	1.3.7-1	1.428,4 kB	4.375,0 kB	[overzicht]
ppc64 (unofficial port)	1.3.6-2+b1	1.458,5 kB	4.480,0 kB	[overzicht]
ppc64el	1.3.7-1	1.473,4 kB	4.304,0 kB	[overzicht]
riscv64	1.3.7-1+b1	1.459,7 kB	3.736,0 kB	[overzicht]
sh4 (unofficial port)	1.3.6-2+b1	1.531,0 kB	3.898,0 kB	[overzicht]
sparc64 (unofficial port)	1.3.6-2+b1	1.354,8 kB	4.621,0 kB	[overzicht]