Pakket: fastqtl (2.184+v7+dfsg-4 en anderen)

[ Bron: fastqtl  ]

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Tags: Field: Biology, Bioinformatics, User Interface: interface::commandline, role::program, Purpose: Analysing

Andere aan fastqtl gerelateerde pakketten

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  of libblas.so.3

  virtueel pakket geboden door libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libboost-iostreams1.83.0 (>= 1.83.0)

  Boost.Iostreams Library

• dep: libboost-program-options1.83.0 (>= 1.83.0)

  program options library for C++

• dep: libbz2-1.0 [sparc64]

  high-quality block-sorting file compressor library - runtime

• dep: libc6 (>= 2.37) [sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.38) [niet alpha, ia64, sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libgsl27 (>= 2.7.1) [ia64]

  GNU Scientific Library (GSL) -- library package

• dep: libgsl28 (>= 2.8+dfsg) [niet ia64]

  GNU Scientific Library (GSL) -- library package

• dep: libgslcblas0 (>= 2.8) [sparc64]

  GNU Scientific Library (GSL) -- blas library package

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 13.1) [alpha, ia64, m68k, sh4]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14) [niet alpha, ia64, m68k, sh4]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: r-mathlib (>= 4.3.3) [ia64]

  GNU R standalone mathematics library

  dep: r-mathlib (>= 4.4.1) [niet ia64]

• dep: zlib1g (>= 1:1.1.4) [sparc64]

  compressiebibliotheek - programma's

• rec: r-cran-argparser

  GNU R command-line argument parser

• rec: r-cran-qvalue

  Pakket niet beschikbaar

• rec: r-cran-tools

  Pakket niet beschikbaar

• sug: fastqtl-doc

  QTL mapper in cis for molecular phenotypes - documentation

fastqtl downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	2.184+v7+dfsg-4+b4	194,1 kB	793,0 kB	[overzicht]
amd64	2.184+v7+dfsg-4+b3	237,4 kB	790,0 kB	[overzicht]
arm64	2.184+v7+dfsg-4+b3	202,7 kB	726,0 kB	[overzicht]
armel	2.184+v7+dfsg-4+b3	187,2 kB	661,0 kB	[overzicht]
armhf	2.184+v7+dfsg-4+b3	189,4 kB	497,0 kB	[overzicht]
hppa (unofficial port)	2.184+v7+dfsg-4+b3	199,8 kB	644,0 kB	[overzicht]
i386	2.184+v7+dfsg-4+b3	234,8 kB	769,0 kB	[overzicht]
ia64 (unofficial port)	2.184+v7+dfsg-4+b2	252,5 kB	1.260,0 kB	[overzicht]
m68k (unofficial port)	2.184+v7+dfsg-4+b3	206,0 kB	717,0 kB	[overzicht]
mips64el	2.184+v7+dfsg-4+b3	195,1 kB	821,0 kB	[overzicht]
ppc64 (unofficial port)	2.184+v7+dfsg-4+b3	213,5 kB	854,0 kB	[overzicht]
ppc64el	2.184+v7+dfsg-4+b3	243,8 kB	918,0 kB	[overzicht]
riscv64	2.184+v7+dfsg-4+b3	208,9 kB	566,0 kB	[overzicht]
s390x	2.184+v7+dfsg-4+b3	219,1 kB	758,0 kB	[overzicht]
sh4 (unofficial port)	2.184+v7+dfsg-4+b3	257,6 kB	726,0 kB	[overzicht]
sparc64 (unofficial port)	2.184+v7+dfsg-4+b3	177,3 kB	1.116,0 kB	[overzicht]
x32 (unofficial port)	2.184+v7+dfsg-4+b4	238,8 kB	741,0 kB	[overzicht]