Pakket: vt (0.57721+ds-3)

[ Bron: vt  ]

toolset for short variant discovery in genetic sequence data

vt is a variant tool set that discovers short variants from Next Generation Sequencing data.

Vt-normalize is a tool to normalize representation of genetic variants in the VCF. Variant normalization is formally defined as the consistent representation of genetic variants in an unambiguous and concise way. In vt a simple general algorithm to enforce this is implemented.

Andere aan vt gerelateerde pakketten

• dep: libc6 (>= 2.29)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.0) [niet armel, armhf]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libpcre2-8-0 (>= 10.22)

  New Perl Compatible Regular Expression Library- 8 bit runtime files

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: r-base-core

  GNU R core of statistical computation and graphics system

vt downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	756,2 kB	2.565,0 kB	[overzicht]
arm64	624,3 kB	2.241,0 kB	[overzicht]
armel	604,2 kB	2.152,0 kB	[overzicht]
armhf	624,4 kB	1.524,0 kB	[overzicht]
i386	763,0 kB	2.776,0 kB	[overzicht]
mips64el	576,1 kB	3.225,0 kB	[overzicht]
mipsel	580,6 kB	2.977,0 kB	[overzicht]
ppc64el	693,5 kB	2.833,0 kB	[overzicht]
s390x	638,5 kB	2.533,0 kB	[overzicht]