Package: examl (3.0.22-6 and others)
Links for examl
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External Resources:
- Homepage [github.com]
Similar packages:
Exascale Maximum Likelihood (ExaML) code for phylogenetic inference
Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees.
ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data.
ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency.
It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.
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Download examl
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 3.0.22-6+b1 | 832.3 kB | 1,921.0 kB | [list of files] |
| amd64 | 3.0.22-6+b2 | 937.8 kB | 6,019.0 kB | [list of files] |
| arm64 | 3.0.22-6+b2 | 778.7 kB | 1,665.0 kB | [list of files] |
| armel | 3.0.22-6+b1 | 797.3 kB | 2,046.0 kB | [list of files] |
| armhf | 3.0.22-6+b1 | 786.3 kB | 1,598.0 kB | [list of files] |
| hppa (unofficial port) | 3.0.22-6+b1 | 813.1 kB | 1,744.0 kB | [list of files] |
| i386 | 3.0.22-6+b1 | 1,078.9 kB | 7,013.0 kB | [list of files] |
| ia64 (unofficial port) | 3.0.22-5 | 955.5 kB | 2,818.0 kB | [list of files] |
| m68k (unofficial port) | 3.0.22-6+b1 | 763.6 kB | 1,782.0 kB | [list of files] |
| mips64el | 3.0.22-6+b2 | 818.6 kB | 1,813.0 kB | [list of files] |
| ppc64 (unofficial port) | 3.0.22-6+b2 | 835.6 kB | 1,921.0 kB | [list of files] |
| ppc64el | 3.0.22-6+b2 | 837.7 kB | 1,793.0 kB | [list of files] |
| riscv64 | 3.0.22-6+b2 | 835.6 kB | 1,577.0 kB | [list of files] |
| s390x | 3.0.22-6+b2 | 826.1 kB | 2,061.0 kB | [list of files] |
| sh4 (unofficial port) | 3.0.22-6+b1 | 888.6 kB | 1,854.0 kB | [list of files] |
| sparc64 (unofficial port) | 3.0.22-6+b2 | 816.1 kB | 3,718.0 kB | [list of files] |
| x32 (unofficial port) | 3.0.22-6+b1 | 781.9 kB | 1,742.0 kB | [list of files] |