[ Source: bcftools ]
Package: bcftools (1.20-2 and others)
Links for bcftools
Debian Resources:
Download Source Package bcftools:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Michael R. Crusoe (QA Page)
- Étienne Mollier (QA Page)
External Resources:
- Homepage [samtools.github.io]
Similar packages:
genomic variant calling and manipulation of VCF/BCF files
BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.
Other Packages Related to bcftools
|
|
|
|
-
- dep: libc6 (>= 2.34) [not alpha, ia64, sh4]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: python3-gffutils [ia64]
- Work with GFF and GTF files in a flexible database framework
-
- dep: python3-matplotlib [ia64]
- Python based plotting system in a style similar to Matlab
-
- dep: sse2-support [i386]
- CPU feature checking - require SSE2
-
- rec: perl
- Larry Wall's Practical Extraction and Report Language
-
- rec: python3-gffutils [not ia64]
- Work with GFF and GTF files in a flexible database framework
-
- rec: python3-matplotlib [not ia64]
- Python based plotting system in a style similar to Matlab
-
- sug: python3
- interactive high-level object-oriented language (default python3 version)
-
- sug: python3-numpy
- Fast array facility to the Python language (Python 3)
-
- sug: texlive-latex-recommended
- TeX Live: LaTeX recommended packages
Download bcftools
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 1.20-2 | 724.5 kB | 4,292.0 kB | [list of files] |
amd64 | 1.20-2 | 742.1 kB | 2,632.0 kB | [list of files] |
arm64 | 1.20-2 | 668.6 kB | 4,035.0 kB | [list of files] |
armel | 1.20-2 | 656.6 kB | 2,359.0 kB | [list of files] |
armhf | 1.20-2 | 654.9 kB | 1,824.0 kB | [list of files] |
hppa (unofficial port) | 1.20-2 | 758.8 kB | 2,509.0 kB | [list of files] |
i386 | 1.20-2 | 784.4 kB | 2,728.0 kB | [list of files] |
ia64 (unofficial port) | 1.20-1 | 909.4 kB | 4,403.0 kB | [list of files] |
m68k (unofficial port) | 1.20-2 | 644.0 kB | 2,246.0 kB | [list of files] |
mips64el | 1.20-2 | 676.8 kB | 4,355.0 kB | [list of files] |
ppc64 (unofficial port) | 1.20-2 | 761.4 kB | 4,583.0 kB | [list of files] |
ppc64el | 1.20-2 | 777.8 kB | 4,610.0 kB | [list of files] |
riscv64 | 1.20-2 | 735.9 kB | 2,184.0 kB | [list of files] |
s390x | 1.20-2 | 766.6 kB | 2,739.0 kB | [list of files] |
sh4 (unofficial port) | 1.20-2 | 797.8 kB | 3,854.0 kB | [list of files] |
sparc64 (unofficial port) | 1.20-2 | 726.0 kB | 42,439.0 kB | [list of files] |
x32 (unofficial port) | 1.20-2 | 735.6 kB | 2,434.0 kB | [list of files] |