Package: bedtools (2.30.0+dfsg-1)

[ Source: bedtools  ]

suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

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Architecture	Package Size	Installed Size	Files
amd64	647.5 kB	2,060.0 kB	[list of files]
arm64	565.4 kB	1,864.0 kB	[list of files]
armel	535.4 kB	1,759.0 kB	[list of files]
armhf	559.3 kB	1,275.0 kB	[list of files]
i386	708.4 kB	2,275.0 kB	[list of files]
mips64el	585.1 kB	2,591.0 kB	[list of files]
mipsel	603.6 kB	2,459.0 kB	[list of files]
ppc64el	663.0 kB	2,520.0 kB	[list of files]
s390x	567.1 kB	2,100.0 kB	[list of files]