Paketti: r-bioc-scuttle (1.16.0+dfsg-3 ja muut)

[ Source: r-bioc-scuttle  ]

BioConductor single-cell RNA-Seq analysis utilities

Provides basic utility functions for performing single-cell analyses, focusing on simple normalization, quality control and data transformations. Also provides some helper functions to assist development of other packages.

Muut pakettiin r-bioc-scuttle liittyvät paketit

• dep: libc6 (>= 2.11) [mips64el, ppc64, s390x, sparc64]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.14) [amd64]

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.11) [alpha]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [ei alpha, hppa, ia64, riscv64, sh4, sparc64]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

  dep: libgcc-s1 (>= 4.2) [sh4]

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC:n apukirjasto

• dep: liblapack3

  Library of linear algebra routines 3 - shared version

  tai liblapack.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libstdc++6 (>= 11) [x32]

  GNU standardi C++ -kirjasto, versio 3

  dep: libstdc++6 (>= 13.1) [hppa, ia64, sh4]

  dep: libstdc++6 (>= 14) [ei hppa, ia64, sh4, x32]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: r-api-4.0

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-api-bioc-3.16 [x32]

  Paketti ei saatavilla

• dep: r-api-bioc-3.18 [hppa, ia64, sh4]

  Paketti ei saatavilla

• dep: r-api-bioc-3.20 [ei hppa, ia64, sh4, x32]

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-2) [x32]

  GNU R core of statistical computation and graphics system

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-delayedmatrixstats [hppa, ia64, sh4, x32]

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-matrixgenerics [ei hppa, ia64, sh4, x32]

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-s4arrays [ei hppa, ia64, sh4, x32]

  foundation of array-like containers in Bioconductor

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-sparsearray [ei hppa, ia64, sh4, x32]

  efficient in-memory representation of multidimensional sparse arrays

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-delayedmatrixstats [ei hppa, ia64, sh4, x32]

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• sug: r-bioc-scran

  BioConductor methods for single-cell RNA-Seq data analysis

• sug: r-bioc-scrnaseq

  Collection of Public Single-Cell RNA-Seq Datasets

• sug: r-bioc-sparsematrixstats [ei hppa, ia64, sh4, x32]

  BioConductor summary statistics for rows and columns of sparse matrices

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

Imuroi r-bioc-scuttle

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
alpha (epävirallinen siirros)	1.16.0+dfsg-3	428.8 kt	874.0 kt	[tiedostoluettelo]
amd64	1.16.0+dfsg-3	439.2 kt	809.0 kt	[tiedostoluettelo]
arm64	1.16.0+dfsg-3	424.6 kt	810.0 kt	[tiedostoluettelo]
hppa (epävirallinen siirros)	1.12.0+dfsg-1	415.5 kt	830.0 kt	[tiedostoluettelo]
ia64 (epävirallinen siirros)	1.12.0+dfsg-1	427.9 kt	1,043.0 kt	[tiedostoluettelo]
mips64el	1.16.0+dfsg-3	422.6 kt	917.0 kt	[tiedostoluettelo]
ppc64 (epävirallinen siirros)	1.16.0+dfsg-3	437.5 kt	941.0 kt	[tiedostoluettelo]
ppc64el	1.16.0+dfsg-3	434.6 kt	873.0 kt	[tiedostoluettelo]
riscv64	1.16.0+dfsg-3	435.6 kt	745.0 kt	[tiedostoluettelo]
s390x	1.16.0+dfsg-3	439.2 kt	833.0 kt	[tiedostoluettelo]
sh4 (epävirallinen siirros)	1.12.0+dfsg-1	428.1 kt	791.0 kt	[tiedostoluettelo]
sparc64 (epävirallinen siirros)	1.16.0+dfsg-3	417.5 kt	1,520.0 kt	[tiedostoluettelo]
x32 (epävirallinen siirros)	1.8.4+dfsg-1	409.7 kt	734.0 kt	[tiedostoluettelo]