[ Source: velvet ]
Package: velvet (1.2.10+dfsg1-9 and others)
Links for velvet
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External Resources:
- Homepage [github.com]
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Nucleic acid sequence assembler for very short reads
Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.
Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.
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Download velvet
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 1.2.10+dfsg1-9 | 690.5 kB | 1,718.0 kB | [list of files] |
| amd64 | 1.2.10+dfsg1-9 | 662.2 kB | 1,276.0 kB | [list of files] |
| arm64 | 1.2.10+dfsg1-9 | 642.6 kB | 1,399.0 kB | [list of files] |
| armel | 1.2.10+dfsg1-9 | 659.7 kB | 1,364.0 kB | [list of files] |
| armhf | 1.2.10+dfsg1-9 | 643.7 kB | 1,052.0 kB | [list of files] |
| hppa (unofficial port) | 1.2.10+dfsg1-9 | 694.3 kB | 1,473.0 kB | [list of files] |
| i386 | 1.2.10+dfsg1-9 | 688.9 kB | 1,466.0 kB | [list of files] |
| ia64 (unofficial port) | 1.2.10+dfsg1-8 | 775.3 kB | 2,661.0 kB | [list of files] |
| m68k (unofficial port) | 1.2.10+dfsg1-9 | 610.8 kB | 1,217.0 kB | [list of files] |
| mips64el | 1.2.10+dfsg1-9 | 658.0 kB | 1,511.0 kB | [list of files] |
| ppc64 (unofficial port) | 1.2.10+dfsg1-9 | 666.5 kB | 1,596.0 kB | [list of files] |
| ppc64el | 1.2.10+dfsg1-9 | 669.4 kB | 1,590.0 kB | [list of files] |
| riscv64 | 1.2.10+dfsg1-9 | 700.9 kB | 1,332.0 kB | [list of files] |
| s390x | 1.2.10+dfsg1-9 | 662.4 kB | 1,337.0 kB | [list of files] |
| sh4 (unofficial port) | 1.2.10+dfsg1-9 | 662.4 kB | 1,457.0 kB | [list of files] |
| sparc64 (unofficial port) | 1.2.10+dfsg1-9 | 664.7 kB | 4,671.0 kB | [list of files] |
| x32 (unofficial port) | 1.2.10+dfsg1-9 | 661.8 kB | 1,253.0 kB | [list of files] |