[ Source: velvet ]
Package: velvet (1.2.10+dfsg1-9 and others)
Links for velvet
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Download Source Package velvet:
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External Resources:
- Homepage [github.com]
Similar packages:
Nucleic acid sequence assembler for very short reads
Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.
Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.
Other Packages Related to velvet
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- dep: libc6 (>= 2.34) [not alpha, ia64, sh4]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.39) [sh4]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.36) [ia64]
-
- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: zlib1g (>= 1:1.2.0.2) [not armel, armhf, hppa, m68k, sh4]
- compression library - runtime
- dep: zlib1g (>= 1:1.2.3.4) [armel, armhf, hppa, m68k, sh4]
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- sug: velvet-example
- Example data for the Velvet sequence assembler
Download velvet
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 1.2.10+dfsg1-9 | 690.5 kB | 1,718.0 kB | [list of files] |
| amd64 | 1.2.10+dfsg1-9 | 662.2 kB | 1,276.0 kB | [list of files] |
| arm64 | 1.2.10+dfsg1-9 | 642.6 kB | 1,399.0 kB | [list of files] |
| armel | 1.2.10+dfsg1-9 | 659.7 kB | 1,364.0 kB | [list of files] |
| armhf | 1.2.10+dfsg1-9 | 643.7 kB | 1,052.0 kB | [list of files] |
| hppa (unofficial port) | 1.2.10+dfsg1-9 | 694.3 kB | 1,473.0 kB | [list of files] |
| i386 | 1.2.10+dfsg1-9 | 688.9 kB | 1,466.0 kB | [list of files] |
| ia64 (unofficial port) | 1.2.10+dfsg1-8 | 775.3 kB | 2,661.0 kB | [list of files] |
| m68k (unofficial port) | 1.2.10+dfsg1-9 | 610.8 kB | 1,217.0 kB | [list of files] |
| mips64el | 1.2.10+dfsg1-9 | 658.0 kB | 1,511.0 kB | [list of files] |
| ppc64 (unofficial port) | 1.2.10+dfsg1-9 | 666.5 kB | 1,596.0 kB | [list of files] |
| ppc64el | 1.2.10+dfsg1-9 | 669.4 kB | 1,590.0 kB | [list of files] |
| riscv64 | 1.2.10+dfsg1-9 | 700.9 kB | 1,332.0 kB | [list of files] |
| s390x | 1.2.10+dfsg1-9 | 662.4 kB | 1,337.0 kB | [list of files] |
| sh4 (unofficial port) | 1.2.10+dfsg1-9 | 662.4 kB | 1,457.0 kB | [list of files] |
| sparc64 (unofficial port) | 1.2.10+dfsg1-9 | 664.7 kB | 4,671.0 kB | [list of files] |
| x32 (unofficial port) | 1.2.10+dfsg1-9 | 661.8 kB | 1,253.0 kB | [list of files] |