Package: samtools (1.11-1)
Links for samtools
Debian Resources:
Download Source Package samtools:
Maintainers:
External Resources:
- Homepage [www.htslib.org]
Similar packages:
processing sequence alignments in SAM, BAM and CRAM formats
Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.
Other Packages Related to samtools
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- dep: libc6 (>= 2.29)
- Biblioteca de C de GNU: Bibliotecas compartidas
also a virtual package provided by libc6-udeb
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- dep: libhts3 (>= 1.11)
- C library for high-throughput sequencing data formats
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- dep: libncurses6 (>= 6)
- Bibliotecas compartidas para el tratamiento del terminal
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- dep: libtinfo6 (>= 6)
- biblioteca compartida de bajo nivel terminfo para manejo del terminal
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- dep: zlib1g (>= 1:1.1.4) [not armel, armhf, i386, mipsel]
- Biblioteca de compresiĆ³n, ejecutables
- dep: zlib1g (>= 1:1.2.3.3) [armel, armhf, i386, mipsel]
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- sug: cwltool
- Common Workflow Language reference implementation
Download samtools
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
amd64 | 531.8 kB | 1,201.0 kB | [list of files] |
arm64 | 513.2 kB | 1,149.0 kB | [list of files] |
armel | 503.0 kB | 1,134.0 kB | [list of files] |
armhf | 507.0 kB | 978.0 kB | [list of files] |
i386 | 562.3 kB | 1,306.0 kB | [list of files] |
mips64el | 518.2 kB | 1,281.0 kB | [list of files] |
mipsel | 525.7 kB | 1,240.0 kB | [list of files] |
ppc64el | 559.1 kB | 1,669.0 kB | [list of files] |
s390x | 512.5 kB | 1,229.0 kB | [list of files] |