套件：maffilter（1.3.1+dfsg-6 以及其他的）

maffilter 的相關連結

Debian 的資源：

下載原始碼套件 maffilter：

維護小組：

外部的資源：

主頁 [jydu.github.io]

相似套件：

process genome alignment in the Multiple Alignment Format

MafFilter applies a series of "filters" to a MAF file, in order to clean it, extract data and computer statistics while keeping track of the associated meta-data such as genome coordinates and quality scores.

 * It can process the alignment to remove low-quality / ambiguous /
   masked regions.
 * It can export data into a single or multiple alignment file in
   format such as Fasta or Clustal.
 * It can read annotation data in GFF or GTF format, and extract the
   corresponding alignment.
 * It can perform sliding windows calculations.
 * It can reconstruct phylogeny/genealogy along the genome alignment.
 * It can compute population genetics statistics, such as site
   frequency spectrum, number of fixed/polymorphic sites, etc.

其他與 maffilter 有關的套件

依賴

推薦

建議

增強

dep: libboost-iostreams1.83.0 (>= 1.83.0)

Boost.Iostreams Library
dep: libbpp-core4t64 (>= 2.4.1)

Bio++ Core library
dep: libbpp-phyl-omics3t64 (>= 2.4.1)

Bio++ Phylogenetics library: genomics components
dep: libbpp-phyl12t64 (>= 2.4.1)

Bio++ Phylogenetic library
dep: libbpp-seq-omics3t64 (>= 2.4.1)

Bio++ Sequence library: genomics components
dep: libbpp-seq12t64 (>= 2.4.1)

Bio++ Sequence library
dep: libc6 (>= 2.34)

GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
dep: libgcc-s1 (>= 3.0) [除 armel, armhf, riscv64]

GCC 支援函式庫

dep: libgcc-s1 (>= 3.4) [riscv64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3

sug: maffilter-examples

process genome alignment in the Multiple Alignment Format (example data)

下載 maffilter

下載可用於所有硬體架構的
硬體架構	版本	套件大小	安裝後大小	檔案
amd64	1.3.1+dfsg-6	259。5 kB	1，308。0 kB	[檔案列表]
arm64	1.3.1+dfsg-6+b1	238。6 kB	1，369。0 kB	[檔案列表]
armel	1.3.1+dfsg-6	222。9 kB	1，179。0 kB	[檔案列表]
armhf	1.3.1+dfsg-6	228。8 kB	1，039。0 kB	[檔案列表]
i386	1.3.1+dfsg-6	266。2 kB	1，271。0 kB	[檔案列表]
mips64el	1.3.1+dfsg-6	225。2 kB	1，489。0 kB	[檔案列表]
ppc64el	1.3.1+dfsg-6	254。5 kB	1，432。0 kB	[檔案列表]
riscv64	1.3.1+dfsg-6	248。2 kB	1，176。0 kB	[檔案列表]
s390x	1.3.1+dfsg-6	247。8 kB	1，320。0 kB	[檔案列表]