[ 原始碼: abyss ]
套件:abyss(2.1.5-7)
de novo, parallel, sequence assembler for short reads
ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.
其他與 abyss 有關的套件
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- dep: bsdmainutils
- collection of more utilities from FreeBSD
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- dep: libc6 (>= 2.14) [amd64]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
- dep: libc6 (>= 2.17) [arm64]
- dep: libc6 (>= 2.28) [armhf, i386]
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- dep: libgcc1 (>= 1:3.0) [amd64, arm64]
- GCC 支援函式庫
- dep: libgcc1 (>= 1:3.5) [armhf]
- dep: libgcc1 (>= 1:4.2) [i386]
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: libopenmpi3
- high performance message passing library -- shared library
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- dep: libsqlite3-0 (>= 3.5.9)
- SQLite 3 shared library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: make
- utility for directing compilation
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- dep: openmpi-bin
- high performance message passing library -- binaries
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- dep: openmpi-common
- high performance message passing library -- common files
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- dep: perl
- Larry Wall's Practical Extraction and Report Language