[ 源代码: unikmer ]
软件包:unikmer(0.20.0-1 以及其他的)
Toolkit for nucleic acid k-mer analysis
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.
K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.
TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
下载 unikmer
硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
---|---|---|---|---|
amd64 | 0.20.0-1+b4 | 3,000.8 kB | 9,598.0 kB | [文件列表] |
arm64 | 0.20.0-1+b4 | 2,575.1 kB | 9,174.0 kB | [文件列表] |
armel | 0.20.0-1+b4 | 2,571.2 kB | 9,145.0 kB | [文件列表] |
armhf | 0.20.0-1+b4 | 2,562.1 kB | 9,145.0 kB | [文件列表] |
i386 | 0.20.0-1+b4 | 2,813.5 kB | 9,190.0 kB | [文件列表] |
mips64el | 0.20.0-1+b4 | 2,319.7 kB | 10,473.0 kB | [文件列表] |
ppc64el | 0.20.0-1+b4 | 2,562.1 kB | 9,428.0 kB | [文件列表] |
riscv64 | 0.20.0-1+b4 | 2,580.9 kB | 9,109.0 kB | [文件列表] |
s390x | 0.20.0-1+b4 | 2,731.2 kB | 10,197.0 kB | [文件列表] |