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[ 源代码: unikmer  ]

软件包:unikmer(0.20.0-1 以及其他的)

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Toolkit for nucleic acid k-mer analysis

unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.

K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.

TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.

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下载 unikmer

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
amd64 0.20.0-1+b4 3,000.8 kB9,598.0 kB [文件列表]
arm64 0.20.0-1+b4 2,575.1 kB9,174.0 kB [文件列表]
armel 0.20.0-1+b4 2,571.2 kB9,145.0 kB [文件列表]
armhf 0.20.0-1+b4 2,562.1 kB9,145.0 kB [文件列表]
i386 0.20.0-1+b4 2,813.5 kB9,190.0 kB [文件列表]
mips64el 0.20.0-1+b4 2,319.7 kB10,473.0 kB [文件列表]
ppc64el 0.20.0-1+b4 2,562.1 kB9,428.0 kB [文件列表]
riscv64 0.20.0-1+b4 2,580.9 kB9,109.0 kB [文件列表]
s390x 0.20.0-1+b4 2,731.2 kB10,197.0 kB [文件列表]