Pakket: unikmer (0.20.0-1 en anderen)

[ Bron: unikmer  ]

Toolkit for nucleic acid k-mer analysis

unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.

K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.

TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.

Andere aan unikmer gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

unikmer downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	0.20.0-1+b4	3.000,8 kB	9.598,0 kB	[overzicht]
arm64	0.20.0-1+b4	2.575,1 kB	9.174,0 kB	[overzicht]
armel	0.20.0-1+b4	2.571,2 kB	9.145,0 kB	[overzicht]
armhf	0.20.0-1+b4	2.562,1 kB	9.145,0 kB	[overzicht]
i386	0.20.0-1+b4	2.813,5 kB	9.190,0 kB	[overzicht]
mips64el	0.20.0-1+b4	2.319,7 kB	10.473,0 kB	[overzicht]
ppc64el	0.20.0-1+b4	2.562,1 kB	9.428,0 kB	[overzicht]
riscv64	0.20.0-1+b4	2.580,9 kB	9.109,0 kB	[overzicht]
s390x	0.20.0-1+b4	2.731,2 kB	10.197,0 kB	[overzicht]