[ 源代码: unikmer ]
软件包:unikmer(0.19.1-1 以及其他的)
Toolkit for nucleic acid k-mer analysis
unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.
K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.
TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.
下载 unikmer
硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
---|---|---|---|---|
amd64 | 0.19.1-1+b3 | 2,467.7 kB | 7,867.0 kB | [文件列表] |
arm64 | 0.19.1-1+b3 | 2,114.2 kB | 7,483.0 kB | [文件列表] |
armel | 0.19.1-1+b3 | 2,124.9 kB | 7,372.0 kB | [文件列表] |
armhf | 0.19.1-1+b3 | 2,116.2 kB | 7,336.0 kB | [文件列表] |
i386 | 0.19.1-1+b3 | 2,311.2 kB | 7,426.0 kB | [文件列表] |
mips64el | 0.19.1-1+b3 | 1,914.7 kB | 8,526.0 kB | [文件列表] |
mipsel | 0.19.1-1+b3 | 1,958.0 kB | 8,248.0 kB | [文件列表] |
ppc64el | 0.19.1-1+b3 | 2,065.4 kB | 7,547.0 kB | [文件列表] |
s390x | 0.19.1-1+b3 | 2,243.3 kB | 8,127.0 kB | [文件列表] |