软件包：sra-toolkit（2.9.3+dfsg-1 以及其他的）
utilities for the NCBI Sequence Read Archive
Tools for reading the SRA archive, generally by converting individual runs into some commonly used format such as fastq.
The textual dumpers "sra-dump" and "vdb-dump" are provided in this release as an aid in visual inspection. It is likely that their actual output formatting will be changed in the near future to a stricter, more formalized representation[s]. PLEASE DO NOT RELY UPON THE OUTPUT FORMAT SEEN IN THIS RELEASE.
The "help" information will be improved in near future releases, and the tool options will become standardized across the set. More documentation will also be provided documentation on the NCBI web site.
Tool options may change in the next release. Version 1 tool options will remain supported wherever possible in order to preserve operation of any existing scripts.
其他与 sra-toolkit 有关的软件包
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- dep: libbz2-1.0
- 高品质块排序文件压缩程序库 - 运行时库
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- dep: libc6 (>= 2.14)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libfuse2 (>= 2.6)
- Filesystem in Userspace (library)
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- dep: libhdf5-103
- Hierarchical Data Format 5 (HDF5) - runtime files - serial version
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- dep: libkdf5-2
- hdf5 access to data in the INSDC Sequence Read Archives
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- dep: libmagic1 (>= 5.12)
- 使用“魔数”识别文件中的数据类型 - 库文件
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- dep: libmbedcrypto3 (>= 2.13)
- lightweight crypto and SSL/TLS library - crypto library
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- dep: libmbedtls12 (>= 2.13)
- lightweight crypto and SSL/TLS library - tls library
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- dep: libmbedx509-0 (>= 2.0)
- lightweight crypto and SSL/TLS library - x509 certificate library
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- dep: libncbi-vdb2
- libraries for using data in the INSDC Sequence Read Archives
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- dep: libncbi-wvdb2
- virtual layer update modul of ncbi-vdb library
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- dep: libstdc++6 (>= 5.2)
- GNU 标准 C++ 库，第3版
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- dep: libsz2
- Adaptive Entropy Coding library - SZIP
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- dep: libxml2 (>= 2.6.27)
- GNOME XML 库
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- dep: zlib1g (>= 1:1.2.2)
- 压缩库 - 运行时
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- rec: med-config (>= 2.1)
- Debian Med general config package