Pakket: unikmer (0.19.1-1 en anderen)

[ Bron: unikmer  ]

Toolkit for nucleic acid k-mer analysis

unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.

K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.

TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.

Andere aan unikmer gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

unikmer downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	0.19.1-1+b3	2.467,7 kB	7.867,0 kB	[overzicht]
arm64	0.19.1-1+b3	2.114,2 kB	7.483,0 kB	[overzicht]
armel	0.19.1-1+b3	2.124,9 kB	7.372,0 kB	[overzicht]
armhf	0.19.1-1+b3	2.116,2 kB	7.336,0 kB	[overzicht]
i386	0.19.1-1+b3	2.311,2 kB	7.426,0 kB	[overzicht]
mips64el	0.19.1-1+b3	1.914,7 kB	8.526,0 kB	[overzicht]
mipsel	0.19.1-1+b3	1.958,0 kB	8.248,0 kB	[overzicht]
ppc64el	0.19.1-1+b3	2.065,4 kB	7.547,0 kB	[overzicht]
s390x	0.19.1-1+b3	2.243,3 kB	8.127,0 kB	[overzicht]