Paket: skewer (0.2.2-6 ve diğerleri)

[ Kaynak: skewer  ]

post-processing of high-throughput DNA sequence reads

skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.

Features

 * Detection and removal of adapter sequences
 * Insertion and deletion allowed in pattern matching
 * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
 * Demultiplexing of barcoded sequencing runs
 * Multi-threading support
 * Trimming based on phred quality scores
 * IUPAC characters for barcodes and adapters
 * Compressed input and output support

skewer ile İlgili Diğer Paketler

• dep: libc6 (>= 2.17) [hppa, m68k, ppc64, sparc64, x32]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.32) [sh4]

  dep: libc6 (>= 2.34) [amd64, armel, armhf, i386, mips64el, ppc64el, riscv64, s390x]

  dep: libc6 (>= 2.38) [arm64]

• dep: libc6.1 (>= 2.17) [alpha]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

  dep: libc6.1 (>= 2.32) [ia64]

• dep: libgcc-s1 (>= 3.0) [armel, armhf, hppa, i386, ia64, m68k değil]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, ia64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

skewer indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	0.2.2-6	87,6 kB	227,0 kB	[dosya listesi]
amd64	0.2.2-6+b1	86,4 kB	216,0 kB	[dosya listesi]
arm64	0.2.2-6+b2	79,1 kB	236,0 kB	[dosya listesi]
armel	0.2.2-6+b1	75,2 kB	235,0 kB	[dosya listesi]
armhf	0.2.2-6+b1	75,5 kB	171,0 kB	[dosya listesi]
hppa (resmi olmayan port)	0.2.2-6	83,6 kB	195,0 kB	[dosya listesi]
i386	0.2.2-6+b1	90,2 kB	231,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	0.2.2-6	107,3 kB	387,0 kB	[dosya listesi]
m68k (resmi olmayan port)	0.2.2-6	83,4 kB	209,0 kB	[dosya listesi]
mips64el	0.2.2-6+b1	81,5 kB	242,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	0.2.2-6	83,7 kB	235,0 kB	[dosya listesi]
ppc64el	0.2.2-6+b1	84,9 kB	236,0 kB	[dosya listesi]
riscv64	0.2.2-6+b1	80,3 kB	159,0 kB	[dosya listesi]
s390x	0.2.2-6+b1	76,0 kB	199,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	0.2.2-6	98,1 kB	190,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	0.2.2-6	75,2 kB	197,0 kB	[dosya listesi]
x32 (resmi olmayan port)	0.2.2-6	86,1 kB	201,0 kB	[dosya listesi]