[ Bron: skewer ]
Pakket: skewer (0.2.2-6 en anderen)
Verwijzigingen voor skewer
Debian bronnen:
Het bronpakket skewer downloaden:
Beheerders:
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
Features
* Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support
Andere aan skewer gerelateerde pakketten
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- dep: libc6 (>= 2.17) [hppa, m68k, ppc64, sparc64, x32]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.32) [sh4]
- dep: libc6 (>= 2.34) [niet alpha, hppa, ia64, m68k, ppc64, sh4, sparc64, x32]
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- dep: libc6.1 (>= 2.17) [alpha]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb
- dep: libc6.1 (>= 2.32) [ia64]
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- dep: libgcc-s1 (>= 3.0) [niet armel, armhf, hppa, i386, ia64, m68k]
- GCC support bibliotheek
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386, ia64]
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- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support bibliotheek
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC support bibliotheek
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
skewer downloaden
Platform | Versie | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
---|---|---|---|---|
alpha (unofficial port) | 0.2.2-6 | 87,6 kB | 227,0 kB | [overzicht] |
amd64 | 0.2.2-6+b1 | 86,4 kB | 216,0 kB | [overzicht] |
arm64 | 0.2.2-6+b1 | 76,4 kB | 235,0 kB | [overzicht] |
armel | 0.2.2-6+b1 | 75,2 kB | 235,0 kB | [overzicht] |
armhf | 0.2.2-6+b1 | 75,5 kB | 171,0 kB | [overzicht] |
hppa (unofficial port) | 0.2.2-6 | 83,6 kB | 195,0 kB | [overzicht] |
i386 | 0.2.2-6+b1 | 90,2 kB | 231,0 kB | [overzicht] |
ia64 (unofficial port) | 0.2.2-6 | 107,3 kB | 387,0 kB | [overzicht] |
m68k (unofficial port) | 0.2.2-6 | 83,4 kB | 209,0 kB | [overzicht] |
mips64el | 0.2.2-6+b1 | 81,5 kB | 242,0 kB | [overzicht] |
ppc64 (unofficial port) | 0.2.2-6 | 83,7 kB | 235,0 kB | [overzicht] |
ppc64el | 0.2.2-6+b1 | 84,9 kB | 236,0 kB | [overzicht] |
riscv64 | 0.2.2-6+b1 | 80,3 kB | 159,0 kB | [overzicht] |
s390x | 0.2.2-6+b1 | 76,0 kB | 199,0 kB | [overzicht] |
sh4 (unofficial port) | 0.2.2-6 | 98,1 kB | 190,0 kB | [overzicht] |
sparc64 (unofficial port) | 0.2.2-6 | 75,2 kB | 197,0 kB | [overzicht] |
x32 (unofficial port) | 0.2.2-6 | 86,1 kB | 201,0 kB | [overzicht] |