Paket: python3-unifrac (1.3-4 ve diğerleri)

[ Kaynak: unifrac  ]

high-performance phylogenetic diversity calculations

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains the Python3 module.

python3-unifrac ile İlgili Diğer Paketler

• dep: cython3 [alpha, m68k]

  C-Extensions for Python 3

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.4) [m68k, mips64el]

• dep: libc6.1 (>= 2.4) [alpha]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

• dep: libgcc-s1 (>= 3.0) [alpha]

  GCC support library

• dep: libssu0 (>= 0.10.0) [alpha]

  high-performance phylogenetic diversity calculations (lib)

  dep: libssu0 (>= 1.1.1) [m68k]

  dep: libssu0 (>= 1.4) [alpha, m68k değil]

• dep: libstdc++6 (>= 11) [alpha]

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.11) [alpha]

  dep: python3 (<< 3.12) [m68k]

  dep: python3 (<< 3.14) [alpha, m68k değil]

  dep: python3 (>= 3.10~) [alpha, m68k]

  dep: python3 (>= 3.13~) [alpha, m68k değil]

• dep: python3-biom-format

  Biological Observation Matrix (BIOM) format (Python 3)

• dep: python3-h5py (>= 3.3.0) [alpha, m68k değil]

  general-purpose Python interface to hdf5

• dep: python3-h5py-serial [alpha, m68k]

  general-purpose Python interface to hdf5 (Python 3 serial)

• dep: python3-iow [alpha değil]

  balanced parentheses tree structure

• dep: python3-numpy

  Python library for numerical computations (Python 3)

• dep: python3-numpy2-abi0 [alpha, m68k değil]

  sanal paketi sağlayan python3-numpy

  ya da python3-numpy-abi9

  sanal paketi sağlayan python3-numpy

• dep: python3-skbio [alpha, m68k]

  Python3 data structures, algorithms, educational resources for bioinformatic

  dep: python3-skbio (>= 0.6.1) [alpha, m68k değil]

python3-unifrac indir

Tüm mevcut mimariler için indir

Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	0.10.0-3	106,4 kB	582,0 kB	[dosya listesi]
amd64	1.3-4+b4	147,4 kB	722,0 kB	[dosya listesi]
arm64	1.3-4+b3	132,6 kB	685,0 kB	[dosya listesi]
m68k (resmi olmayan port)	1.1.1-2	135,9 kB	715,0 kB	[dosya listesi]
mips64el	1.3-4+b3	128,8 kB	758,0 kB	[dosya listesi]
ppc64el	1.3-4+b3	144,7 kB	813,0 kB	[dosya listesi]
riscv64	1.3-4+b3	145,4 kB	649,0 kB	[dosya listesi]