Pakket: python3-unifrac (1.3-4 en anderen)

[ Bron: unifrac  ]

high-performance phylogenetic diversity calculations

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains the Python3 module.

Andere aan python3-unifrac gerelateerde pakketten

• dep: cython3 [alpha, m68k]

  C-Extensions for Python 3

• dep: libc6 (>= 2.14) [amd64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.4) [m68k, mips64el]

• dep: libc6.1 (>= 2.4) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libgcc-s1 (>= 3.0) [alpha]

  GCC support bibliotheek

• dep: libssu0 (>= 0.10.0) [alpha]

  high-performance phylogenetic diversity calculations (lib)

  dep: libssu0 (>= 1.1.1) [m68k]

  dep: libssu0 (>= 1.4) [niet alpha, m68k]

• dep: libstdc++6 (>= 11) [alpha]

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.11) [alpha]

  dep: python3 (<< 3.12) [m68k]

  dep: python3 (<< 3.13) [niet alpha, m68k]

  dep: python3 (>= 3.10~) [alpha, m68k]

  dep: python3 (>= 3.12~) [niet alpha, m68k]

• dep: python3-biom-format

  Biological Observation Matrix (BIOM) format (Python 3)

• dep: python3-h5py (>= 3.3.0) [niet alpha, m68k]

  general-purpose Python interface to hdf5

• dep: python3-h5py-serial [alpha, m68k]

  general-purpose Python interface to hdf5 (Python 3 serial)

• dep: python3-iow [niet alpha]

  balanced parentheses tree structure

• dep: python3-numpy [alpha, m68k]

  Fast array facility to the Python language (Python 3)

  dep: python3-numpy (>= 1:1.25.0) [niet alpha, m68k]

• dep: python3-numpy-abi9 [niet alpha, m68k]

  virtueel pakket geboden door python3-numpy

• dep: python3-skbio [alpha, m68k]

  Python3 data structures, algorithms, educational resources for bioinformatic

  dep: python3-skbio (>= 0.6.1) [niet alpha, m68k]

python3-unifrac downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.10.0-3	106,4 kB	582,0 kB	[overzicht]
amd64	1.3-4	146,6 kB	721,0 kB	[overzicht]
arm64	1.3-4	129,8 kB	684,0 kB	[overzicht]
m68k (unofficial port)	1.1.1-2	135,9 kB	715,0 kB	[overzicht]
mips64el	1.3-4	127,0 kB	756,0 kB	[overzicht]
ppc64el	1.3-4	143,6 kB	748,0 kB	[overzicht]
riscv64	1.3-4	142,9 kB	644,0 kB	[overzicht]