Paket: hinge (0.5.0-2) [debports]

[ Kaynak:  ]

long read genome assembler based on hinging

HINGE is a genome assembler that seeks to achieve optimal repeat resolution by distinguishing repeats that can be resolved given the data from those that cannot. This is accomplished by adding “hinges” to reads for constructing an overlap graph where only unresolvable repeats are merged. As a result, HINGE combines the error resilience of overlap-based assemblers with repeat-resolution capabilities of de Bruijn graph assemblers.

hinge ile İlgili Diğer Paketler

• dep: daligner

  local alignment discovery between long nucleotide sequencing reads

• dep: dascrubber

  alignment-based scrubbing pipeline for DNA sequencing reads

• dep: dazzdb

  manage nucleotide sequencing read data

• dep: libc6 (>= 2.7)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libgcc1 (>= 1:3.0)

  Paket mevcut değil

• dep: libgomp1 (>= 4.2.1)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python

  Paket mevcut değil

• dep: python-colormap

  Paket mevcut değil

• dep: python-configparser

  Paket mevcut değil

• dep: python-matplotlib

  Paket mevcut değil

• dep: python-networkx

  Paket mevcut değil

• dep: python-numpy

  Paket mevcut değil

• dep: python-pbcore

  sanal paketi sağlayan python3-pbcore

• dep: python-ujson

  Paket mevcut değil

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

hinge indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
ppc64 (resmi olmayan port)	367,3 kB	3.140,0 kB	[dosya listesi]