Paket: sprai (0.9.9.23+dfsg-2)

[ Kaynak: sprai  ]

single-pass sequencing read accuracy improver

Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.

sprai ile İlgili Diğer Paketler

• dep: libc6 (>= 2.17) [arm64]

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

  dep: libc6 (>= 2.7) [arm64 değil]

• dep: ncbi-blast+ (>= 2.2.27)

  next generation suite of BLAST sequence search tools

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• dep: time

  GNU time program for measuring CPU resource usage

• sug: make

  utility for directing compilation

• sug: pbalign

  map Pacific Biosciences reads to reference DNA sequences

• sug: pbgenomicconsensus

  Pacific Biosciences variant and consensus caller

• sug: pbh5tools

  tools for manipulating Pacific Biosciences HDF5 files

sprai indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	1.480,4 kB	1.715,0 kB	[dosya listesi]
arm64	1.477,5 kB	1.699,0 kB	[dosya listesi]
armhf	1.474,3 kB	1.667,0 kB	[dosya listesi]
i386	1.480,1 kB	1.715,0 kB	[dosya listesi]