Package: sprai (0.9.9.23+dfsg-2)
Links for sprai
Debian Resources:
Download Source Package sprai:
Maintainers:
External Resources:
- Homepage [zombie.cb.k.u-tokyo.ac.jp]
Similar packages:
single-pass sequencing read accuracy improver
Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.
Other Packages Related to sprai
|
|
|
|
-
- dep: libc6 (>= 2.17) [arm64]
- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.7) [not arm64]
-
- dep: ncbi-blast+ (>= 2.2.27)
- next generation suite of BLAST sequence search tools
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: time
- GNU time program for measuring CPU resource usage
-
- sug: make
- utility for directing compilation
-
- sug: pbalign
- map Pacific Biosciences reads to reference DNA sequences
-
- sug: pbgenomicconsensus
- Pacific Biosciences variant and consensus caller
-
- sug: pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files
Download sprai
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
amd64 | 1,480.4 kB | 1,715.0 kB | [list of files] |
arm64 | 1,477.5 kB | 1,699.0 kB | [list of files] |
armhf | 1,474.3 kB | 1,667.0 kB | [list of files] |
i386 | 1,480.1 kB | 1,715.0 kB | [list of files] |