Paket: boxshade (3.3.1-14)

[ Kaynak: boxshade  ]

Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

Etiketler: Biyoloji: Clustal/ALN, Proteinler, Alan: field::biology, field::biology:bioinformatics, Geliştirildiği dil: implemented-in::c, interface::commandline, Rol: Program, Kapsam: scope::utility, use::typesetting, Desteklenen Biçimler: works-with-format::html, works-with-format::plaintext, works-with-format::postscript, works-with-format::tex, Şununla çalışır: Ek etiket gerektiriyor, Metin

boxshade ile İlgili Diğer Paketler

• dep: libc6 (>= 2.7)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• sug: kalign

  Global and progressive multiple sequence alignment

  ya da clustalw

  global multiple nucleotide or peptide sequence alignment

  ya da mafft

  Multiple alignment program for amino acid or nucleotide sequences

  ya da hmmer

  profile hidden Markov models for protein sequence analysis

• sug: seaview

  Multiplatform interface for sequence alignment and phylogeny

• sug: texlive-latex-extra

  TeX Live: LaTeX additional packages

• sug: xfig

  Facility for Interactive Generation of figures under X11

boxshade indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
mips64el	53,3 kB	187,0 kB	[dosya listesi]