Paket: libvcflib-tools (1.0.2+dfsg-2)

[ Kaynak: libvcflib  ]

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

libvcflib-tools ile İlgili Diğer Paketler

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

• dep: libdisorder0 (>= 0.0.2)

  library for entropy measurement of byte streams

• dep: libfastahack0 (>= 0.0+git20160702.bbc645f+dfsg-5~) [amd64, arm64, mips64el, ppc64el]

  library for indexing and sequence extraction from FASTA files (lib)

  dep: libfastahack0 (>= 1.0.0+dfsg) [amd64, arm64, mips64el, ppc64el değil]

• dep: libgcc-s1 (>= 3.0) [armel, armhf, ppc64el değil]

  GCC support library

  dep: libgcc-s1 (>= 3.4.4) [ppc64el]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

  determine similar regions between two strings or genomic sequences (lib)

• dep: libstdc++6 (>= 5.2) [armel, armhf]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 9) [armel, armhf değil]

• dep: libtabixpp0 (>= 1.0.0)

  C++ wrapper to tabix indexer

• dep: libvcflib1 (>= 1.0.2+dfsg)

  C++ library for parsing and manipulating VCF files

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: r-base-core

  GNU R core of statistical computation and graphics system

• dep: r-cran-ggplot2

  implementation of the Grammar of Graphics

• dep: r-cran-gridbase

  GNU R Integration of base and grid graphics

• dep: r-cran-plyr

  tools for splitting, applying and combining data

• sug: r-cran-pracma

  practical numerical math functions for GNU R

libvcflib-tools indir

Tüm mevcut mimariler için indir

Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	703,5 kB	4.707,0 kB	[dosya listesi]
arm64	641,8 kB	4.099,0 kB	[dosya listesi]
armel	604,0 kB	3.654,0 kB	[dosya listesi]
armhf	624,0 kB	2.950,0 kB	[dosya listesi]
i386	741,8 kB	4.758,0 kB	[dosya listesi]
mips64el	633,4 kB	4.721,0 kB	[dosya listesi]
mipsel	639,3 kB	4.453,0 kB	[dosya listesi]
ppc64el	703,5 kB	7.435,0 kB	[dosya listesi]
s390x	647,7 kB	4.471,0 kB	[dosya listesi]