Paket: python-biopython (1.70+dfsg-2 och andra) [debports]

[ Källkod:  ]

Python library for bioinformatics (implemented in Python 2)

The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.

It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project.

This package is targeting Python version 2.

Andra paket besläktade med python-biopython

• dep: libc6 (>= 2.3.4) [hppa]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.4) [sparc64]

• dep: python [sparc64]

  Paketet inte tillgängligt

  dep: python (<< 2.8)

  dep: python (>= 2.7)

• dep: python-numpy (>= 1:1.10.0~b1) [sparc64]

  Paketet inte tillgängligt

  dep: python-numpy (>= 1:1.8.0) [hppa]

• dep: python-numpy-abi9

  Paketet inte tillgängligt

• dep: python-reportlab

  Paketet inte tillgängligt

• rec: ncbi-blast+

  next generation suite of BLAST sequence search tools

• rec: python-biopython-doc (= 1.65+dfsg-1) [hppa]

  Documentation for the Biopython library

  rec: python-biopython-doc (= 1.70+dfsg-2) [sparc64]

• sug: clustalo

  General-purpose multiple sequence alignment program for proteins

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: dialign

  Segment-based multiple sequence alignment

• sug: dssp

  protein secondary structure assignment based on 3D structure

• sug: emboss

  European molecular biology open software suite

• sug: fasttree

  phylogenetic trees from alignments of nucleotide or protein sequences

• sug: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• sug: muscle

  Multiple alignment program of protein sequences

• sug: phylip [sparc64]

  package of programs for inferring phylogenies

• sug: phyml

  Phylogenetic estimation using Maximum Likelihood

• sug: prank

  Probabilistic Alignment Kit for DNA, codon and amino-acid sequences

• sug: probcons

  PROBabilistic CONSistency-based multiple sequence alignment

• sug: python-matplotlib

  Paketet inte tillgängligt

• sug: python-mysqldb

  Paketet inte tillgängligt

• sug: python-pil

  Paketet inte tillgängligt

• sug: python-psycopg2

  Paketet inte tillgängligt

• sug: python-rdflib (>= 4)

  Paketet inte tillgängligt

• sug: python-renderpm

  Paketet inte tillgängligt

• sug: python-scipy [sparc64]

  Paketet inte tillgängligt

• sug: python-tk

  Paketet inte tillgängligt

• sug: raxml

  Randomized Axelerated Maximum Likelihood of phylogenetic trees

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: t-coffee

  Multiple Sequence Alignment

• sug: wise (>= 2.4.1-16)

  comparison of biopolymers, like DNA and protein sequences

Hämta python-biopython

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
hppa (inofficiell anpassning)	1.65+dfsg-1	1.151,5 kbyte	7.815,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	1.70+dfsg-2	1.137,3 kbyte	8.036,0 kbyte	[filförteckning]